[Zion] Zero-out thread fx_data_ on creation.

- Create a bochs build script.
- Properly configure COM1

.bochsrc

@@ -0,0 +1,15 @@
+megs: 1024
+ata0-master: type=disk, path=builddbg/disk.img, mode=flat, cylinders=512, heads=16, spt=50
+display_library: sdl2, options="gui_debug"
+boot: disk
+com1: enabled=1, mode=file, dev=serial.out, baud=9600, parity=none, bits=8, stopbits=1
+cpu: model=corei7_sandy_bridge_2600k
+pci: enabled=1, chipset=i440bx
+log: bochs.log
+# TODO: Make this portable, by building bochs locally.
+romimage: file=/home/drew/opt/bochs/share/bochs/BIOS-bochs-latest
+vgaromimage: file=/home/drew/opt/bochs/share/bochs/VGABIOS-lgpl-latest.bin
+vga: extension=vbe
+port_e9_hack: enabled=1
+# Breaks on XCHGW %BX, %BX
+magic_break: enabled=1

.gitignore

@@ -4,6 +4,9 @@ __pycache__/
 .ccls-cache/
 compile_commands.json
 
+bochs.log
+serial.out
+
 sysroot/bin
 sysroot/usr
 sysroot/.crates.toml

rust/lib/mammoth/build.rs

@@ -15,4 +15,11 @@ fn main() {
         curr_directory.to_str().unwrap()
     );
     println!("cargo:rustc-link-lib=zion_stub");
+
+    // Trying to recreate bindings?
+    // Run the following commands
+    // gcc -E zion/include/zcall.h > /tmp/expanded.h
+    // bindgen --verbose --use-core --no-layout-tests /tmp/expanded.h -o rust/lib/mammoth/src/bindings.rs -- -x c++
+    //
+    // Then go fix the ThreadExit struct.
 }

rust/lib/mammoth/src/bindings.rs

@@ -1,153 +1,5 @@
 /* automatically generated by rust-bindgen 0.69.4 */
 
-pub const _STDINT_H: u32 = 1;
-pub const _FEATURES_H: u32 = 1;
-pub const _ISOC95_SOURCE: u32 = 1;
-pub const _ISOC99_SOURCE: u32 = 1;
-pub const _ISOC11_SOURCE: u32 = 1;
-pub const _ISOC2X_SOURCE: u32 = 1;
-pub const _POSIX_SOURCE: u32 = 1;
-pub const _POSIX_C_SOURCE: u32 = 200809;
-pub const _XOPEN_SOURCE: u32 = 700;
-pub const _XOPEN_SOURCE_EXTENDED: u32 = 1;
-pub const _LARGEFILE64_SOURCE: u32 = 1;
-pub const _DEFAULT_SOURCE: u32 = 1;
-pub const _ATFILE_SOURCE: u32 = 1;
-pub const _DYNAMIC_STACK_SIZE_SOURCE: u32 = 1;
-pub const __GLIBC_USE_ISOC2X: u32 = 1;
-pub const __USE_ISOC11: u32 = 1;
-pub const __USE_ISOC99: u32 = 1;
-pub const __USE_ISOC95: u32 = 1;
-pub const __USE_ISOCXX11: u32 = 1;
-pub const __USE_POSIX: u32 = 1;
-pub const __USE_POSIX2: u32 = 1;
-pub const __USE_POSIX199309: u32 = 1;
-pub const __USE_POSIX199506: u32 = 1;
-pub const __USE_XOPEN2K: u32 = 1;
-pub const __USE_XOPEN2K8: u32 = 1;
-pub const __USE_XOPEN: u32 = 1;
-pub const __USE_XOPEN_EXTENDED: u32 = 1;
-pub const __USE_UNIX98: u32 = 1;
-pub const _LARGEFILE_SOURCE: u32 = 1;
-pub const __USE_XOPEN2K8XSI: u32 = 1;
-pub const __USE_XOPEN2KXSI: u32 = 1;
-pub const __USE_LARGEFILE: u32 = 1;
-pub const __USE_LARGEFILE64: u32 = 1;
-pub const __WORDSIZE: u32 = 64;
-pub const __WORDSIZE_TIME64_COMPAT32: u32 = 1;
-pub const __SYSCALL_WORDSIZE: u32 = 64;
-pub const __TIMESIZE: u32 = 64;
-pub const __USE_MISC: u32 = 1;
-pub const __USE_ATFILE: u32 = 1;
-pub const __USE_DYNAMIC_STACK_SIZE: u32 = 1;
-pub const __USE_GNU: u32 = 1;
-pub const __USE_FORTIFY_LEVEL: u32 = 0;
-pub const __GLIBC_USE_DEPRECATED_GETS: u32 = 0;
-pub const __GLIBC_USE_DEPRECATED_SCANF: u32 = 0;
-pub const __GLIBC_USE_C2X_STRTOL: u32 = 1;
-pub const _STDC_PREDEF_H: u32 = 1;
-pub const __STDC_IEC_559__: u32 = 1;
-pub const __STDC_IEC_60559_BFP__: u32 = 201404;
-pub const __STDC_IEC_559_COMPLEX__: u32 = 1;
-pub const __STDC_IEC_60559_COMPLEX__: u32 = 201404;
-pub const __STDC_ISO_10646__: u32 = 201706;
-pub const __GNU_LIBRARY__: u32 = 6;
-pub const __GLIBC__: u32 = 2;
-pub const __GLIBC_MINOR__: u32 = 39;
-pub const _SYS_CDEFS_H: u32 = 1;
-pub const __glibc_c99_flexarr_available: u32 = 1;
-pub const __LDOUBLE_REDIRECTS_TO_FLOAT128_ABI: u32 = 0;
-pub const __HAVE_GENERIC_SELECTION: u32 = 0;
-pub const __GLIBC_USE_LIB_EXT2: u32 = 1;
-pub const __GLIBC_USE_IEC_60559_BFP_EXT: u32 = 1;
-pub const __GLIBC_USE_IEC_60559_BFP_EXT_C2X: u32 = 1;
-pub const __GLIBC_USE_IEC_60559_EXT: u32 = 1;
-pub const __GLIBC_USE_IEC_60559_FUNCS_EXT: u32 = 1;
-pub const __GLIBC_USE_IEC_60559_FUNCS_EXT_C2X: u32 = 1;
-pub const __GLIBC_USE_IEC_60559_TYPES_EXT: u32 = 1;
-pub const _BITS_TYPES_H: u32 = 1;
-pub const _BITS_TYPESIZES_H: u32 = 1;
-pub const __OFF_T_MATCHES_OFF64_T: u32 = 1;
-pub const __INO_T_MATCHES_INO64_T: u32 = 1;
-pub const __RLIM_T_MATCHES_RLIM64_T: u32 = 1;
-pub const __STATFS_MATCHES_STATFS64: u32 = 1;
-pub const __KERNEL_OLD_TIMEVAL_MATCHES_TIMEVAL64: u32 = 1;
-pub const __FD_SETSIZE: u32 = 1024;
-pub const _BITS_TIME64_H: u32 = 1;
-pub const _BITS_WCHAR_H: u32 = 1;
-pub const _BITS_STDINT_INTN_H: u32 = 1;
-pub const _BITS_STDINT_UINTN_H: u32 = 1;
-pub const _BITS_STDINT_LEAST_H: u32 = 1;
-pub const INT8_MIN: i32 = -128;
-pub const INT16_MIN: i32 = -32768;
-pub const INT32_MIN: i32 = -2147483648;
-pub const INT8_MAX: u32 = 127;
-pub const INT16_MAX: u32 = 32767;
-pub const INT32_MAX: u32 = 2147483647;
-pub const UINT8_MAX: u32 = 255;
-pub const UINT16_MAX: u32 = 65535;
-pub const UINT32_MAX: u32 = 4294967295;
-pub const INT_LEAST8_MIN: i32 = -128;
-pub const INT_LEAST16_MIN: i32 = -32768;
-pub const INT_LEAST32_MIN: i32 = -2147483648;
-pub const INT_LEAST8_MAX: u32 = 127;
-pub const INT_LEAST16_MAX: u32 = 32767;
-pub const INT_LEAST32_MAX: u32 = 2147483647;
-pub const UINT_LEAST8_MAX: u32 = 255;
-pub const UINT_LEAST16_MAX: u32 = 65535;
-pub const UINT_LEAST32_MAX: u32 = 4294967295;
-pub const INT_FAST8_MIN: i32 = -128;
-pub const INT_FAST16_MIN: i64 = -9223372036854775808;
-pub const INT_FAST32_MIN: i64 = -9223372036854775808;
-pub const INT_FAST8_MAX: u32 = 127;
-pub const INT_FAST16_MAX: u64 = 9223372036854775807;
-pub const INT_FAST32_MAX: u64 = 9223372036854775807;
-pub const UINT_FAST8_MAX: u32 = 255;
-pub const UINT_FAST16_MAX: i32 = -1;
-pub const UINT_FAST32_MAX: i32 = -1;
-pub const INTPTR_MIN: i64 = -9223372036854775808;
-pub const INTPTR_MAX: u64 = 9223372036854775807;
-pub const UINTPTR_MAX: i32 = -1;
-pub const PTRDIFF_MIN: i64 = -9223372036854775808;
-pub const PTRDIFF_MAX: u64 = 9223372036854775807;
-pub const SIG_ATOMIC_MIN: i32 = -2147483648;
-pub const SIG_ATOMIC_MAX: u32 = 2147483647;
-pub const SIZE_MAX: i32 = -1;
-pub const WINT_MIN: u32 = 0;
-pub const WINT_MAX: u32 = 4294967295;
-pub const INT8_WIDTH: u32 = 8;
-pub const UINT8_WIDTH: u32 = 8;
-pub const INT16_WIDTH: u32 = 16;
-pub const UINT16_WIDTH: u32 = 16;
-pub const INT32_WIDTH: u32 = 32;
-pub const UINT32_WIDTH: u32 = 32;
-pub const INT64_WIDTH: u32 = 64;
-pub const UINT64_WIDTH: u32 = 64;
-pub const INT_LEAST8_WIDTH: u32 = 8;
-pub const UINT_LEAST8_WIDTH: u32 = 8;
-pub const INT_LEAST16_WIDTH: u32 = 16;
-pub const UINT_LEAST16_WIDTH: u32 = 16;
-pub const INT_LEAST32_WIDTH: u32 = 32;
-pub const UINT_LEAST32_WIDTH: u32 = 32;
-pub const INT_LEAST64_WIDTH: u32 = 64;
-pub const UINT_LEAST64_WIDTH: u32 = 64;
-pub const INT_FAST8_WIDTH: u32 = 8;
-pub const UINT_FAST8_WIDTH: u32 = 8;
-pub const INT_FAST16_WIDTH: u32 = 64;
-pub const UINT_FAST16_WIDTH: u32 = 64;
-pub const INT_FAST32_WIDTH: u32 = 64;
-pub const UINT_FAST32_WIDTH: u32 = 64;
-pub const INT_FAST64_WIDTH: u32 = 64;
-pub const UINT_FAST64_WIDTH: u32 = 64;
-pub const INTPTR_WIDTH: u32 = 64;
-pub const UINTPTR_WIDTH: u32 = 64;
-pub const INTMAX_WIDTH: u32 = 64;
-pub const UINTMAX_WIDTH: u32 = 64;
-pub const PTRDIFF_WIDTH: u32 = 64;
-pub const SIG_ATOMIC_WIDTH: u32 = 32;
-pub const SIZE_WIDTH: u32 = 64;
-pub const WCHAR_WIDTH: u32 = 32;
-pub const WINT_WIDTH: u32 = 32;
 pub type __u_char = ::core::ffi::c_uchar;
 pub type __u_short = ::core::ffi::c_ushort;
 pub type __u_int = ::core::ffi::c_uint;
@@ -257,7 +109,6 @@ pub const kZionPortCreate: u64 = 80;
 pub const kZionPortSend: u64 = 81;
 pub const kZionPortRecv: u64 = 82;
 pub const kZionPortPoll: u64 = 83;
-pub const kZionIrqRegister: u64 = 88;
 pub const kZionMsiIrqRegister: u64 = 89;
 pub const kZionEndpointCreate: u64 = 96;
 pub const kZionEndpointSend: u64 = 97;
@@ -274,6 +125,10 @@ pub const kZionSemaphoreCreate: u64 = 131;
 pub const kZionSemaphoreWait: u64 = 132;
 pub const kZionSemaphoreSignal: u64 = 133;
 pub const kZionDebug: u64 = 65536;
+pub const kZionPciRead: u64 = 69632;
+pub const kZionPciCreateBound: u64 = 69633;
+pub const kZionPciReadBound: u64 = 69634;
+pub const kZionPciWriteBound: u64 = 69635;
 pub const kZIrqKbd: u64 = 34;
 pub const kZIrqPci1: u64 = 48;
 pub const kZIrqPci2: u64 = 49;
@@ -351,10 +206,6 @@ pub struct ZThreadStartReq {
 #[repr(C)]
 #[derive(Debug, Copy, Clone)]
 pub struct ZThreadExitReq {}
-extern "C" {
-    #[link_name = "\u{1}_Z11ZThreadExitv"]
-    pub fn ZThreadExit() -> z_err_t;
-}
 #[repr(C)]
 #[derive(Debug, Copy, Clone)]
 pub struct ZThreadWaitReq {
@@ -473,12 +324,6 @@ pub struct ZPortPollReq {
 }
 #[repr(C)]
 #[derive(Debug, Copy, Clone)]
-pub struct ZIrqRegisterReq {
-    pub irq_num: u64,
-    pub port_cap: *mut z_cap_t,
-}
-#[repr(C)]
-#[derive(Debug, Copy, Clone)]
 pub struct ZMsiIrqRegisterReq {
     pub irq_num: *mut u64,
     pub port_cap: *mut z_cap_t,
@@ -574,3 +419,36 @@ pub struct ZDebugReq {
     pub message: *const ::core::ffi::c_char,
     pub size: u64,
 }
+#[repr(C)]
+#[derive(Debug, Copy, Clone)]
+pub struct ZPciReadReq {
+    pub pci_cap: z_cap_t,
+    pub bus: u8,
+    pub slot: u8,
+    pub func: u8,
+    pub offset: u8,
+    pub output: *mut u32,
+}
+#[repr(C)]
+#[derive(Debug, Copy, Clone)]
+pub struct ZPciCreateBoundReq {
+    pub pci_cap: z_cap_t,
+    pub bus: u8,
+    pub slot: u8,
+    pub func: u8,
+    pub new_cap: *mut z_cap_t,
+}
+#[repr(C)]
+#[derive(Debug, Copy, Clone)]
+pub struct ZPciReadBoundReq {
+    pub pci_cap: z_cap_t,
+    pub offset: u8,
+    pub data: *mut u32,
+}
+#[repr(C)]
+#[derive(Debug, Copy, Clone)]
+pub struct ZPciWriteBoundReq {
+    pub pci_cap: z_cap_t,
+    pub offset: u8,
+    pub data: u32,
+}

rust/lib/mammoth/src/syscall.rs

@@ -472,3 +472,25 @@ pub fn semaphone_wait(sem_cap: &Capability) -> Result<(), ZError> {
         },
     )
 }
+
+pub fn pci_read(
+    pci_cap: &Capability,
+    bus: u8,
+    slot: u8,
+    func: u8,
+    offset: u8,
+) -> Result<u32, ZError> {
+    let mut data: u32 = 0;
+    syscall(
+        zion::kZionPciRead,
+        &zion::ZPciReadReq {
+            pci_cap: pci_cap.raw(),
+            bus,
+            slot,
+            func,
+            offset,
+            output: &mut data as *mut u32,
+        },
+    )?;
+    Ok(data)
+}

rust/sys/yellowstone/src/main.rs

@@ -36,13 +36,14 @@ fn spawn_from_vmmo(vmmo_cap: z_cap_t, server_cap: Capability) -> Result<(), ZErr
 
 #[no_mangle]
 extern "C" fn main() -> z_err_t {
-    let pci_region = MemoryRegion::from_cap(Capability::take(unsafe { BOOT_PCI_VMMO }))
-        .expect("Failed to create PCI region");
     let fb_region = MemoryRegion::from_cap(Capability::take(unsafe { BOOT_FRAMEBUFFER_INFO_VMMO }))
         .expect("Failed to create Framebuffer region");
     let context = Arc::new(
-        server::YellowstoneServerContext::new(pci_region, fb_region)
-            .expect("Failed to create yellowstone context"),
+        server::YellowstoneServerContext::new(
+            Capability::take(unsafe { BOOT_PCI_VMMO }),
+            fb_region,
+        )
+        .expect("Failed to create yellowstone context"),
     );
     let handler = server::YellowstoneServerImpl::new(context.clone());
     let server = YellowstoneServer::new(handler).expect("Couldn't create yellowstone server");

rust/sys/yellowstone/src/pci.rs

@@ -1,14 +1,29 @@
-use mammoth::{cap::Capability, mem::MemoryRegion, zion::ZError};
+use mammoth::{
+    cap::Capability,
+    mem::MemoryRegion,
+    syscall,
+    zion::{kZionPerm_All, ZError},
+};
+
+enum PciType {
+    Port(Capability),
+    Memory(MemoryRegion),
+}
 
 pub struct PciReader {
-    memory_region: MemoryRegion,
+    internal_type: PciType,
 }
 
 type DevPredicate = fn(u8, u8, u8) -> bool;
 
 impl PciReader {
-    pub fn new(memory_region: MemoryRegion) -> Self {
-        Self { memory_region }
+    pub fn new(capability: Capability) -> Self {
+        let internal_type =
+            match MemoryRegion::from_cap(capability.duplicate(kZionPerm_All).unwrap()) {
+                Ok(mem) => PciType::Memory(mem),
+                Err(_) => PciType::Port(capability),
+            };
+        Self { internal_type }
     }
 
     pub fn get_ahci_region(&self) -> Result<Capability, ZError> {
@@ -28,15 +43,13 @@ impl PciReader {
     }
 
     fn probe_pci(&self, pred: DevPredicate) -> Option<Capability> {
-        let base_header = self.pci_header(0, 0, 0);
-        if (base_header.header_type & 0x80) == 0 {
+        if (self.header_type(0, 0, 0) & 0x80) == 0 {
             if let Some(dev) = self.probe_bus(pred, 0) {
                 return Some(dev);
             }
         } else {
             for fun in 0..8 {
-                let fun_hdr = self.pci_header(0, 0, fun);
-                if fun_hdr.vendor_id != 0xFFFF {
+                if self.vendor_id(0, 0, fun) != 0xFFFF {
                     if let Some(dev) = self.probe_bus(pred, fun) {
                         return Some(dev);
                     }
@@ -56,8 +69,7 @@ impl PciReader {
     }
 
     fn probe_device(&self, pred: DevPredicate, bus: u8, dev: u8) -> Option<Capability> {
-        let device_base_header = self.pci_header(bus, dev, 0);
-        if device_base_header.vendor_id == 0xFFFF {
+        if self.vendor_id(bus, dev, 0) == 0xFFFF {
             return None;
         }
 
@@ -65,7 +77,7 @@ impl PciReader {
             return Some(dev);
         }
 
-        if (device_base_header.header_type & 0x80) != 0 {
+        if (self.header_type(bus, dev, 0) & 0x80) != 0 {
             for fun in 1..8 {
                 if let Some(dev) = self.probe_function(pred, bus, dev, fun) {
                     return Some(dev);
@@ -76,37 +88,66 @@ impl PciReader {
     }
 
     fn probe_function(&self, pred: DevPredicate, bus: u8, dev: u8, fun: u8) -> Option<Capability> {
-        let function_header = self.pci_header(bus, dev, fun);
+        let (class, subclass, prog_interface) = self.class_codes(bus, dev, fun);
 
         mammoth::debug!(
             "PCI Function: {:#x} {:#x} {:#x}",
-            function_header.class_code,
-            function_header.subclass,
-            function_header.prog_interface
+            class,
+            subclass,
+            prog_interface
         );
 
-        if pred(
-            function_header.class_code,
-            function_header.subclass,
-            function_header.prog_interface,
-        ) {
+        if pred(class, subclass, prog_interface) {
             mammoth::debug!("Found!");
-            let offset = pci_header_offset(bus, dev, fun);
-            Some(
-                self.memory_region
-                    .duplicate(offset as u64, 0x1000)
-                    .expect("Failed to duplicate PCI cap"),
-            )
+            Some(self.create_cap(bus, dev, fun))
         } else {
             None
         }
     }
 
-    fn pci_header(&self, bus: u8, dev: u8, fun: u8) -> &PciHeader {
-        let offset = pci_header_offset(bus, dev, fun);
-        let header_slice: &[u8] =
-            &self.memory_region.slice()[offset..offset + size_of::<PciHeader>()];
-        unsafe { header_slice.as_ptr().cast::<PciHeader>().as_ref().unwrap() }
+    fn header_type(&self, bus: u8, dev: u8, fun: u8) -> u8 {
+        let data = self.read_at(bus, dev, fun, 0xC);
+
+        ((data >> 16) & 0xFF) as u8
+    }
+
+    fn vendor_id(&self, bus: u8, dev: u8, fun: u8) -> u16 {
+        let data = self.read_at(bus, dev, fun, 0);
+
+        (data & 0xFFFF) as u16
+    }
+
+    fn class_codes(&self, bus: u8, dev: u8, fun: u8) -> (u8, u8, u8) {
+        let data = self.read_at(bus, dev, fun, 0x8);
+
+        let class = (data >> 24) as u8;
+        let subclass = ((data >> 16) & 0xFF) as u8;
+        let prog_if = ((data >> 8) & 0xFF) as u8;
+
+        (class, subclass, prog_if)
+    }
+
+    fn read_at(&self, bus: u8, dev: u8, fun: u8, off: u8) -> u32 {
+        match &self.internal_type {
+            PciType::Memory(region) => {
+                let offset = pci_header_offset(bus, dev, fun);
+                let header_slice: &[u32] = &region.slice()[offset..offset + size_of::<PciHeader>()];
+                header_slice[(off >> 2) as usize]
+            }
+            PciType::Port(pci_cap) => syscall::pci_read(pci_cap, bus, dev, fun, off).unwrap(),
+        }
+    }
+
+    fn create_cap(&self, bus: u8, dev: u8, fun: u8) -> Capability {
+        match &self.internal_type {
+            PciType::Memory(region) => {
+                let offset = pci_header_offset(bus, dev, fun);
+                region
+                    .duplicate(offset as u64, 0x1000)
+                    .expect("Failed to duplicate PCI cap")
+            }
+            PciType::Port(_pci_cap) => todo!(),
+        }
     }
 }
 

rust/sys/yellowstone/src/server.rs

@@ -43,13 +43,11 @@ impl YellowstoneServerContext {
             green_mask_shift: fb_info.green_mask_shift as u64,
         }
     }
-}
 
-impl YellowstoneServerContext {
-    pub fn new(pci_region: MemoryRegion, fb_region: MemoryRegion) -> Result<Self, ZError> {
+    pub fn new(pci_cap: Capability, fb_region: MemoryRegion) -> Result<Self, ZError> {
         Ok(Self {
             registration_semaphore: mammoth::sync::Semaphore::new()?,
-            pci_reader: PciReader::new(pci_region),
+            pci_reader: PciReader::new(pci_cap),
             framebuffer_info_region: fb_region,
             service_map: Mutex::new(BTreeMap::new()),
         })

scripts/bochs.sh

@@ -0,0 +1,19 @@
+#! /bin/bash
+
+set -e
+
+DIR="$(cd "$(dirname "${BASH_SOURCE[0]}")" && pwd)"
+
+BUILD_DIR="${DIR}/../builddbg"
+
+bash ${DIR}/build.sh
+sudo sh ${DIR}/build_image.sh ${BUILD_DIR}/disk.img
+
+BOCHS_ARGS=
+if [[ $1 == "debug" ]]; then
+  BOCHS_ARGS+="-dbg"
+fi
+
+# TODO Make this portable, build bochs as a part of toolchain?
+~/opt/bochs/bin/bochs $BOCHS_ARGS -q
+

scripts/build.sh

@@ -0,0 +1,32 @@
+#! /bin/bash
+
+set -e
+
+DIR="$(cd "$(dirname "${BASH_SOURCE[0]}")" && pwd)"
+
+echo $DIR
+
+BUILD_DIR="${DIR}/../builddbg"
+
+pushd $BUILD_DIR 
+ninja 
+ninja install
+
+CARGO_USR_ROOT="${DIR}/../sysroot/usr/"
+CARGO_SYS_ROOT="${DIR}/../sysroot/"
+
+# Need to pushd so rustup gets the toolchain from rust/rust_toolchain.toml
+pushd "${DIR}/../rust"
+
+for BIN in ${DIR}/../rust/usr/*/; do
+  cargo install --force --path "${BIN}" --root $CARGO_USR_ROOT
+done
+
+for BIN in ${DIR}/../rust/sys/*/; do
+  cargo install --all-features --force --path "${BIN}" --root $CARGO_SYS_ROOT
+done
+popd
+
+popd
+
+

scripts/build_image.sh

@@ -1,7 +1,11 @@
-#!/us
+#! /bin/bash
 
 set -e
 
+SCRIPT_DIR=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
+REPO_ROOT="$SCRIPT_DIR/.."
+BUILD_DIR="$REPO_ROOT/builddbg"
+
 if [[ $# -ne 1 ]]; then
   echo "Must specify disk image name."
 fi
@@ -15,11 +19,14 @@ if [ -z "$dev" ]; then
 fi
 echo "Loopback device: ${dev}"
 
+EFI_DIR="$BUILD_DIR/efi"
+SYSROOT="$BUILD_DIR/sysroot"
+
 cleanup() {
-  umount efi
-  rm -rf efi
-  umount sysroot
-  rm -rf sysroot
+  umount $EFI_DIR
+  rm -rf $EFI_DIR
+  umount $SYSROOT
+  rm -rf $SYSROOT
   losetup -d $dev
 }
 trap cleanup EXIT
@@ -30,22 +37,23 @@ mke2fs "${dev}p2"
 
 limine bios-install "${dev}"
 
-mkdir -p efi/
-mount "${dev}p1" efi/
 
-mkdir -p efi/EFI/BOOT
-cp /usr/share/limine/BOOTX64.EFI efi/EFI/BOOT
-cp /usr/share/limine/limine-bios.sys efi/
-cp ../zion/boot/limine.conf efi/
-cp zion/zion efi/
-mkdir -p efi/sys
-cp ../sysroot/bin/yellowstone efi/sys/yellowstone
-cp ../sysroot/bin/denali efi/sys/denali
-cp ../sysroot/bin/victoriafalls efi/sys/victoriafalls
+mkdir -p $EFI_DIR
+mount "${dev}p1" $EFI_DIR
 
-mkdir -p sysroot
-mount "${dev}p2" sysroot/
-rsync -a ../sysroot .
-ls sysroot/
+mkdir -p $EFI_DIR/EFI/BOOT
+cp /usr/share/limine/BOOTX64.EFI $EFI_DIR/EFI/BOOT
+cp /usr/share/limine/limine-bios.sys $EFI_DIR
+cp $REPO_ROOT/zion/boot/limine.conf $EFI_DIR/
+cp $BUILD_DIR/zion/zion $EFI_DIR/
+mkdir -p $EFI_DIR/sys
+cp $REPO_ROOT/sysroot/bin/yellowstone $EFI_DIR/sys/yellowstone
+cp $REPO_ROOT/sysroot/bin/denali $EFI_DIR/sys/denali
+cp $REPO_ROOT/sysroot/bin/victoriafalls $EFI_DIR/sys/victoriafalls
+
+mkdir -p $SYSROOT
+mount "${dev}p2" $SYSROOT
+rsync -a "$REPO_ROOT/sysroot" $BUILD_DIR
+ls $SYSROOT
 
 chown drew:drew $1

scripts/qemu.sh

@@ -8,26 +8,9 @@ echo $DIR
 
 BUILD_DIR="${DIR}/../builddbg"
 
-pushd $BUILD_DIR 
-ninja 
-ninja install
 
-CARGO_USR_ROOT="${DIR}/../sysroot/usr/"
-CARGO_SYS_ROOT="${DIR}/../sysroot/"
-
-# Need to pushd so rustup gets the toolchain from rust/rust_toolchain.toml
-pushd "${DIR}/../rust"
-
-for BIN in ${DIR}/../rust/usr/*/; do
-  cargo install --force --path "${BIN}" --root $CARGO_USR_ROOT
-done
-
-for BIN in ${DIR}/../rust/sys/*/; do
-  cargo install --all-features --force --path "${BIN}" --root $CARGO_SYS_ROOT
-done
-popd
-
-sudo sh ${DIR}/build_image.sh disk.img
+bash ${DIR}/build.sh
+sudo sh ${DIR}/build_image.sh ${BUILD_DIR}/disk.img
 
 QEMU_ARGS=
 if [[ $1 == "debug" ]]; then
@@ -35,7 +18,7 @@ if [[ $1 == "debug" ]]; then
 fi
 
 # Use machine q35 to access PCI devices.
-qemu-system-x86_64 -machine q35 -d guest_errors -m 1G -serial stdio -hda disk.img ${QEMU_ARGS} -device nec-usb-xhci,id=xhci -device usb-kbd,bus=xhci.0
+qemu-system-x86_64 -machine q35 -d guest_errors -m 1G -serial stdio -hda ${BUILD_DIR}/disk.img ${QEMU_ARGS} -device nec-usb-xhci,id=xhci -device usb-kbd,bus=xhci.0
 popd
 
 # Extra options to add to this script in the future.

zion/CMakeLists.txt

@@ -30,6 +30,7 @@ add_executable(zion
   object/ipc_object.cpp
   object/memory_object.cpp
   object/mutex.cpp
+  object/pci_port.cpp
   object/port.cpp
   object/process.cpp
   object/reply_port.cpp
@@ -45,6 +46,7 @@ add_executable(zion
   syscall/debug.cpp
   syscall/ipc.cpp
   syscall/memory_object.cpp
+  syscall/pci.cpp
   syscall/process.cpp
   syscall/synchronization.cpp
   syscall/syscall.cpp

zion/common/port.h

@@ -11,3 +11,13 @@ static inline uint8_t inb(uint16_t port) {
 static inline void outb(uint16_t port, uint8_t value) {
   asm volatile("outb %0, %1" ::"a"(value), "Nd"(port));
 }
+
+static inline uint32_t inl(uint16_t port) {
+  uint32_t result;
+  asm volatile("inl %1, %0" : "=a"(result) : "Nd"(port));
+  return result;
+}
+
+static inline void outl(uint16_t port, uint32_t value) {
+  asm volatile("outl %0, %1" ::"a"(value), "Nd"(port));
+}

zion/debug/debug.cpp

@@ -5,14 +5,18 @@
 
 #define COM1 0x3f8
 
+#define BOCHS_DBG 1
+
 namespace {
 bool is_transmit_empty() { return (inb(COM1 + 5) & 0x20) != 0; }
 
 void dbgputchar(char c) {
-  while (!is_transmit_empty())
-    ;
+  while (!is_transmit_empty());
 
   outb(COM1, c);
+#if BOCHS_DBG
+  outb(0xe9, c);
+#endif
 }
 
 void dbg(const glcr::StringView& str) {
@@ -39,3 +43,52 @@ void dbgln(const glcr::StringView& str) {
   dbg(str);
   dbg("\n");
 }
+
+namespace {
+
+// Helper function to write a byte to a specified COM1 register offset
+void write_serial_port(uint16_t offset, uint8_t value) {
+  outb(COM1 + offset, value);
+}
+
+// Helper function to read a byte from a specified COM1 register offset
+uint8_t read_serial_port(uint16_t offset) { return inb(COM1 + offset); }
+
+}  // namespace
+
+namespace serial {
+
+// Function to initialize the serial port with a given baud rate
+void initialize(uint32_t baud_rate) {
+  // Disable interrupts
+  write_serial_port(1, 0x00);
+
+  // Enable DLAB (Divisor Latch Access Bit) in Line Control Register (LCR)
+  write_serial_port(3, read_serial_port(3) | 0x80);
+
+  // Calculate the divisor
+  // Baud rate = 115200 / divisor (approximately)
+  uint16_t divisor = 115200 / baud_rate;
+
+  // Set the low byte of the divisor
+  write_serial_port(0, divisor & 0xFF);
+
+  // Set the high byte of the divisor
+  write_serial_port(1, (divisor >> 8) & 0xFF);
+
+  // Clear DLAB and set data bits, stop bits, and parity
+  // 8 data bits, 1 stop bit, no parity
+  write_serial_port(3, 0x03);  // 00000011b
+
+  // Enable FIFO, clear buffers, set trigger level (e.g., 1 byte)
+  write_serial_port(2, 0xC7);  // 11000111b
+
+  // Enable IRQs (optional, for interrupt-driven communication)
+  // write_serial_port(1, 0x01);
+
+  // Set Modem Control Register (MCR)
+  // Enable RTS, DTR, OUT1, OUT2, loopback off, IRQs enabled
+  write_serial_port(4, 0x0B);  // 00001011b
+}
+
+}  // namespace serial

zion/debug/debug.h

@@ -37,3 +37,9 @@ void panic(const char* str, Args&&... args) {
 #define UNREACHABLE                                                  \
   panic("Unreachable {}, {}", glcr::StringView(__FILE__), __LINE__); \
   __builtin_unreachable();
+
+namespace serial {
+
+void initialize(uint32_t baud_rate);
+
+}

zion/include/zcall.h

@@ -71,3 +71,14 @@ SYS1(SemaphoreWait, z_cap_t, semaphore_cap);
 SYS1(SemaphoreSignal, z_cap_t, semaphore_cap);
 
 SYS2(Debug, const char*, message, uint64_t, size);
+
+// TODO: These should be handled with a more generic user-space interface.
+// To be honest we could just have an inl and outl interface that is provided to
+// yellowstone and the extra ipc load would be a good stress test of our
+// performance
+SYS6(PciRead, z_cap_t, pci_cap, uint8_t, bus, uint8_t, slot, uint8_t, func,
+     uint8_t, offset, uint32_t*, output);
+SYS5(PciCreateBound, z_cap_t, pci_cap, uint8_t, bus, uint8_t, slot, uint8_t,
+     func, z_cap_t*, new_cap);
+SYS3(PciReadBound, z_cap_t, pci_cap, uint8_t, offset, uint32_t*, data);
+SYS3(PciWriteBound, z_cap_t, pci_cap, uint8_t, offset, uint32_t, data);

zion/include/ztypes.h

@@ -67,6 +67,11 @@ const uint64_t kZionSemaphoreSignal = 0x85;
 // Debugging Calls.
 const uint64_t kZionDebug = 0x1'0000;
 
+const uint64_t kZionPciRead = 0x1'1000;
+const uint64_t kZionPciCreateBound = 0x1'1001;
+const uint64_t kZionPciReadBound = 0x1'1002;
+const uint64_t kZionPciWriteBound = 0x1'1003;
+
 // Irq Types
 const uint64_t kZIrqKbd = 0x22;
 const uint64_t kZIrqPci1 = 0x30;

zion/loader/init_loader.cpp

@@ -8,6 +8,7 @@
 #include "debug/debug.h"
 #include "include/zcall.h"
 #include "memory/paging_util.h"
+#include "object/pci_port.h"
 #include "object/process.h"
 #include "object/thread.h"
 #include "scheduler/process_manager.h"
@@ -187,7 +188,9 @@ void LoadInitProgram() {
   WriteFramebufferVmmo(port);
 
   if (WritePciVmmo(port, Z_BOOT_PCI_VMMO) != glcr::OK) {
-    panic("Failed to provide PCI info to init.");
+    dbgln("Failed to find PCIe space, creating PCI IO Port Cap");
+    auto pci_port = PciPort::Create();
+    port->WriteKernel(Z_BOOT_PCI_VMMO, MakeRefCounted<Capability>(pci_port));
   }
 
   // Start process.

zion/object/kernel_object.h

@@ -16,6 +16,10 @@ class KernelObject : public glcr::RefCounted<KernelObject> {
     REPLY_PORT = 0x8,
     MUTEX = 0x9,
     SEMAPHORE = 0x10,
+
+    // Temporary.
+    PCI_CAP = 0x100,
+    PCI_BOUND_CAP = 0x101,
   };
 
   virtual uint64_t TypeTag() = 0;

zion/object/pci_port.cpp

@@ -0,0 +1,46 @@
+#include "object/pci_port.h"
+
+#include "common/port.h"
+
+namespace {
+
+const uint16_t PCI_ADDR_PORT = 0xCF8;
+const uint16_t PCI_DATA_PORT = 0xCFC;
+
+uint32_t AddressOf(uint8_t bus, uint8_t slot, uint8_t func, uint8_t offset) {
+  uint32_t lbus = (uint32_t)bus;
+  uint32_t lslot = (uint32_t)slot;
+  uint32_t lfunc = (uint32_t)func;
+
+  return (uint32_t)((lbus << 16) | (lslot << 11) | (lfunc << 8) |
+                    (offset & 0xFC) | ((uint32_t)0x80000000));
+}
+
+uint32_t PciReadAtOffset(uint8_t bus, uint8_t slot, uint8_t func,
+                         uint8_t offset) {
+  uint32_t address = AddressOf(bus, slot, func, offset);
+  outl(PCI_ADDR_PORT, address);
+  return inl(PCI_DATA_PORT);
+}
+
+void PciWriteAtOffset(uint8_t bus, uint8_t slot, uint8_t func, uint8_t offset,
+                      uint32_t word) {
+  uint32_t address = AddressOf(bus, slot, func, offset);
+  outl(PCI_ADDR_PORT, address);
+  outl(PCI_DATA_PORT, word);
+}
+
+}  // namespace
+
+uint32_t PciPort::ReadAtOffset(uint8_t bus, uint8_t slot, uint8_t func,
+                               uint8_t offset) {
+  return PciReadAtOffset(bus, slot, func, offset);
+}
+
+uint32_t PciPortBound::Read(uint8_t offset) {
+  return PciReadAtOffset(bus_, slot_, func_, offset);
+}
+
+void PciPortBound::Write(uint8_t offset, uint32_t data) {
+  PciWriteAtOffset(bus_, slot_, func_, offset, data);
+}

zion/object/pci_port.h

@@ -0,0 +1,60 @@
+#include <glacier/memory/ref_ptr.h>
+
+#include "include/ztypes.h"
+#include "object/kernel_object.h"
+
+class PciPort;
+class PciPortBound;
+
+template <>
+struct KernelObjectTag<PciPort> {
+  static const uint64_t type = KernelObject::PCI_CAP;
+};
+
+class PciPort : public KernelObject {
+ public:
+  static uint64_t DefaultPermissions() {
+    return kZionPerm_Write | kZionPerm_Read | kZionPerm_Duplicate |
+           kZionPerm_Transmit;
+  }
+
+  uint64_t TypeTag() override { return KernelObject::PCI_CAP; }
+
+  static glcr::RefPtr<PciPort> Create() { return glcr::AdoptPtr(new PciPort); }
+
+  uint32_t ReadAtOffset(uint8_t bus, uint8_t slot, uint8_t func,
+                        uint8_t offset);
+
+ private:
+  PciPort() {}
+};
+
+template <>
+struct KernelObjectTag<PciPortBound> {
+  static const uint64_t type = KernelObject::PCI_BOUND_CAP;
+};
+
+class PciPortBound : public KernelObject {
+ public:
+  static uint64_t DefaultPermissions() {
+    return kZionPerm_Write | kZionPerm_Read | kZionPerm_Duplicate;
+  }
+
+  uint64_t TypeTag() override { return KernelObject::PCI_BOUND_CAP; }
+
+  static glcr::RefPtr<PciPortBound> Create(uint8_t bus, uint8_t slot,
+                                           uint8_t func) {
+    return glcr::AdoptPtr(new PciPortBound(bus, slot, func));
+  }
+
+  uint32_t Read(uint8_t offset);
+  void Write(uint8_t offset, uint32_t data);
+
+ private:
+  PciPortBound(uint8_t bus, uint8_t slot, uint8_t func)
+      : bus_(bus), slot_(slot), func_(func) {}
+
+  uint8_t bus_;
+  uint8_t slot_;
+  uint8_t func_;
+};

zion/object/thread.cpp

@@ -51,6 +51,9 @@ Thread::Thread(Process& proc, uint64_t tid)
   if (reinterpret_cast<uint64_t>(fx_data_) & 0x8) {
     fx_data_ += 8;
   }
+  for (uint16_t i = 0; i < 512; i++) {
+    fx_data_[i] = 0;
+  }
 }
 
 uint64_t Thread::pid() const { return process_.id(); }

zion/syscall/pci.cpp

@@ -0,0 +1,44 @@
+#include "syscall/pci.h"
+
+#include "object/pci_port.h"
+#include "scheduler/scheduler.h"
+
+z_err_t PciRead(ZPciReadReq* req) {
+  auto& curr_proc = gScheduler->CurrentProcess();
+  auto pci_cap = curr_proc.GetCapability(req->pci_cap);
+  RET_ERR(ValidateCapability<PciPort>(pci_cap, kZionPerm_Read));
+
+  *req->output = pci_cap->obj<PciPort>()->ReadAtOffset(req->bus, req->slot,
+                                                       req->func, req->offset);
+
+  return glcr::OK;
+}
+
+z_err_t PciCreateBound(ZPciCreateBoundReq* req) {
+  auto& curr_proc = gScheduler->CurrentProcess();
+  auto pci_cap = curr_proc.GetCapability(req->pci_cap);
+  RET_ERR(ValidateCapability<PciPort>(pci_cap, kZionPerm_Duplicate));
+
+  *req->new_cap = curr_proc.AddNewCapability(
+      PciPortBound::Create(req->bus, req->slot, req->func));
+  return glcr::OK;
+}
+
+z_err_t PciReadBound(ZPciReadBoundReq* req) {
+  auto& curr_proc = gScheduler->CurrentProcess();
+  auto pci_cap = curr_proc.GetCapability(req->pci_cap);
+  RET_ERR(ValidateCapability<PciPortBound>(pci_cap, kZionPerm_Read));
+
+  *req->data = pci_cap->obj<PciPortBound>()->Read(req->offset);
+
+  return glcr::OK;
+}
+z_err_t PciWriteBound(ZPciWriteBoundReq* req) {
+  auto& curr_proc = gScheduler->CurrentProcess();
+  auto pci_cap = curr_proc.GetCapability(req->pci_cap);
+  RET_ERR(ValidateCapability<PciPortBound>(pci_cap, kZionPerm_Write));
+
+  pci_cap->obj<PciPortBound>()->Write(req->offset, req->data);
+
+  return glcr::OK;
+}

zion/syscall/pci.h

@@ -0,0 +1,6 @@
+#include "include/zcall.h"
+
+z_err_t PciRead(ZPciReadReq* req);
+z_err_t PciCreateBound(ZPciCreateBoundReq* req);
+z_err_t PciReadBound(ZPciReadBoundReq* req);
+z_err_t PciWriteBound(ZPciWriteBoundReq* req);

zion/zion.cpp

@@ -20,6 +20,7 @@
 #include "syscall/syscall.h"
 
 extern "C" void zion() {
+  serial::initialize(9600);
   dbgln("[boot] Init GDT & IDT.");
   InitGdt();
   InitIdt();